Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5087 |
| Number of amino acids: | 304 |
| Molecular Weight: | 33274.73 Da |
| Theoretical pI: | 8.67 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 10.53% |
| Cysteine CYS (C) | 5 | 1.64% |
| Glutamic Acid GLU (E) | 7 | 2.3% |
| Aspartic Acid ASP (D) | 19 | 6.25% |
| Glycine GLY (G) | 32 | 10.53% |
| Phynylalanine PHE (F) | 11 | 3.62% |
| Isoleucine ILE (I) | 6 | 1.97% |
| Histidine HIS (H) | 11 | 3.62% |
| Lysine LYS (K) | 16 | 5.26% |
| Methionine MET (M) | 5 | 1.64% |
| Leucine LEU (L) | 31 | 10.2% |
| Asparagine ASN (N) | 10 | 3.29% |
| Glutamine GLN (Q) | 6 | 1.97% |
| Proline PRO (P) | 16 | 5.26% |
| Serine SER (S) | 21 | 6.91% |
| Arginine ARG (R) | 14 | 4.61% |
| Threonine THR (T) | 16 | 5.26% |
| Tryptophan TRP (W) | 9 | 2.96% |
| Valine VAL (V) | 20 | 6.58% |
| Tyrosine TYR (Y) | 17 | 5.59% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1507 |
| Hydrogen | H | 2275 |
| Nitrogen | N | 409 |
| Oxygen | O | 427 |
| Sulphur | S | 10 |
| Formula | C1507H2275N409O427S10 |
| Total Number of Atoms: | 4628 |
| Total number of positively charged residues (ARG + LYS): | 30 |
| Total number of negatively charged residues (ASP + GLU): | 26 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 75080 Absorption 0.1% (=1 g/l) 2.256, assuming all pairs of CYS residues form cystines Ext. coefficient 74830 Absorption 0.1% (=1 g/l) 2.249, assuming all CYS residues are reduced |
| Aromaticity: | 0.122 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.62 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.92, 25.99, 24.67] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.0725 |
| Grand average of hydropathicity (GRAVY): | -0.21 |