Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5078 |
| Number of amino acids: | 845 |
| Molecular Weight: | 95569.53 Da |
| Theoretical pI: | 9.45 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 43 | 5.09% |
| Cysteine CYS (C) | 14 | 1.66% |
| Glutamic Acid GLU (E) | 49 | 5.8% |
| Aspartic Acid ASP (D) | 31 | 3.67% |
| Glycine GLY (G) | 71 | 8.4% |
| Phynylalanine PHE (F) | 37 | 4.38% |
| Isoleucine ILE (I) | 41 | 4.85% |
| Histidine HIS (H) | 26 | 3.08% |
| Lysine LYS (K) | 84 | 9.94% |
| Methionine MET (M) | 17 | 2.01% |
| Leucine LEU (L) | 65 | 7.69% |
| Asparagine ASN (N) | 43 | 5.09% |
| Glutamine GLN (Q) | 30 | 3.55% |
| Proline PRO (P) | 41 | 4.85% |
| Serine SER (S) | 53 | 6.27% |
| Arginine ARG (R) | 34 | 4.02% |
| Threonine THR (T) | 59 | 6.98% |
| Tryptophan TRP (W) | 18 | 2.13% |
| Valine VAL (V) | 53 | 6.27% |
| Tyrosine TYR (Y) | 36 | 4.26% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4309 |
| Hydrogen | H | 6692 |
| Nitrogen | N | 1174 |
| Oxygen | O | 1227 |
| Sulphur | S | 31 |
| Formula | C4309H6692N1174O1227S31 |
| Total Number of Atoms: | 13433 |
| Total number of positively charged residues (ARG + LYS): | 118 |
| Total number of negatively charged residues (ASP + GLU): | 80 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 153515 Absorption 0.1% (=1 g/l) 1.606, assuming all pairs of CYS residues form cystines Ext. coefficient 152640 Absorption 0.1% (=1 g/l) 1.597, assuming all CYS residues are reduced |
| Aromaticity: | 0.108 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.35 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.59, 24.62, 20.59] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 72.2012 |
| Grand average of hydropathicity (GRAVY): | -0.52 |