Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5075 |
| Number of amino acids: | 431 |
| Molecular Weight: | 49898.87 Da |
| Theoretical pI: | 8.4 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 4.18% |
| Cysteine CYS (C) | 5 | 1.16% |
| Glutamic Acid GLU (E) | 24 | 5.57% |
| Aspartic Acid ASP (D) | 27 | 6.26% |
| Glycine GLY (G) | 31 | 7.19% |
| Phynylalanine PHE (F) | 29 | 6.73% |
| Isoleucine ILE (I) | 20 | 4.64% |
| Histidine HIS (H) | 13 | 3.02% |
| Lysine LYS (K) | 33 | 7.66% |
| Methionine MET (M) | 10 | 2.32% |
| Leucine LEU (L) | 40 | 9.28% |
| Asparagine ASN (N) | 25 | 5.8% |
| Glutamine GLN (Q) | 18 | 4.18% |
| Proline PRO (P) | 14 | 3.25% |
| Serine SER (S) | 27 | 6.26% |
| Arginine ARG (R) | 21 | 4.87% |
| Threonine THR (T) | 20 | 4.64% |
| Tryptophan TRP (W) | 12 | 2.78% |
| Valine VAL (V) | 29 | 6.73% |
| Tyrosine TYR (Y) | 15 | 3.48% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2265 |
| Hydrogen | H | 3446 |
| Nitrogen | N | 608 |
| Oxygen | O | 639 |
| Sulphur | S | 15 |
| Formula | C2265H3446N608O639S15 |
| Total Number of Atoms: | 6973 |
| Total number of positively charged residues (ARG + LYS): | 54 |
| Total number of negatively charged residues (ASP + GLU): | 51 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 88600 Absorption 0.1% (=1 g/l) 1.776, assuming all pairs of CYS residues form cystines Ext. coefficient 88350 Absorption 0.1% (=1 g/l) 1.771, assuming all CYS residues are reduced |
| Aromaticity: | 0.130 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.19 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.64, 22.51, 21.35] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.9814 |
| Grand average of hydropathicity (GRAVY): | -0.43 |