Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5074 |
| Number of amino acids: | 583 |
| Molecular Weight: | 66381.1 Da |
| Theoretical pI: | 7.02 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 5.32% |
| Cysteine CYS (C) | 4 | 0.69% |
| Glutamic Acid GLU (E) | 24 | 4.12% |
| Aspartic Acid ASP (D) | 41 | 7.03% |
| Glycine GLY (G) | 40 | 6.86% |
| Phynylalanine PHE (F) | 31 | 5.32% |
| Isoleucine ILE (I) | 33 | 5.66% |
| Histidine HIS (H) | 15 | 2.57% |
| Lysine LYS (K) | 35 | 6% |
| Methionine MET (M) | 11 | 1.89% |
| Leucine LEU (L) | 45 | 7.72% |
| Asparagine ASN (N) | 31 | 5.32% |
| Glutamine GLN (Q) | 18 | 3.09% |
| Proline PRO (P) | 35 | 6% |
| Serine SER (S) | 53 | 9.09% |
| Arginine ARG (R) | 29 | 4.97% |
| Threonine THR (T) | 23 | 3.95% |
| Tryptophan TRP (W) | 18 | 3.09% |
| Valine VAL (V) | 40 | 6.86% |
| Tyrosine TYR (Y) | 26 | 4.46% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3017 |
| Hydrogen | H | 4554 |
| Nitrogen | N | 802 |
| Oxygen | O | 865 |
| Sulphur | S | 15 |
| Formula | C3017H4554N802O865S15 |
| Total Number of Atoms: | 9253 |
| Total number of positively charged residues (ARG + LYS): | 64 |
| Total number of negatively charged residues (ASP + GLU): | 65 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 137990 Absorption 0.1% (=1 g/l) 2.079, assuming all pairs of CYS residues form cystines Ext. coefficient 137740 Absorption 0.1% (=1 g/l) 2.075, assuming all CYS residues are reduced |
| Aromaticity: | 0.129 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.71 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.10, 27.27, 19.04] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.3928 |
| Grand average of hydropathicity (GRAVY): | -0.40 |