Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5066 |
| Number of amino acids: | 318 |
| Molecular Weight: | 33402.48 Da |
| Theoretical pI: | 8.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 11.95% |
| Cysteine CYS (C) | 17 | 5.35% |
| Glutamic Acid GLU (E) | 5 | 1.57% |
| Aspartic Acid ASP (D) | 14 | 4.4% |
| Glycine GLY (G) | 45 | 14.15% |
| Phynylalanine PHE (F) | 16 | 5.03% |
| Isoleucine ILE (I) | 9 | 2.83% |
| Histidine HIS (H) | 5 | 1.57% |
| Lysine LYS (K) | 7 | 2.2% |
| Methionine MET (M) | 6 | 1.89% |
| Leucine LEU (L) | 12 | 3.77% |
| Asparagine ASN (N) | 10 | 3.14% |
| Glutamine GLN (Q) | 13 | 4.09% |
| Proline PRO (P) | 18 | 5.66% |
| Serine SER (S) | 23 | 7.23% |
| Arginine ARG (R) | 18 | 5.66% |
| Threonine THR (T) | 24 | 7.55% |
| Tryptophan TRP (W) | 7 | 2.2% |
| Valine VAL (V) | 18 | 5.66% |
| Tyrosine TYR (Y) | 13 | 4.09% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1460 |
| Hydrogen | H | 2203 |
| Nitrogen | N | 419 |
| Oxygen | O | 440 |
| Sulphur | S | 23 |
| Formula | C1460H2203N419O440S23 |
| Total Number of Atoms: | 4545 |
| Total number of positively charged residues (ARG + LYS): | 25 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 58870 Absorption 0.1% (=1 g/l) 1.762, assuming all pairs of CYS residues form cystines Ext. coefficient 57870 Absorption 0.1% (=1 g/l) 1.733, assuming all CYS residues are reduced |
| Aromaticity: | 0.113 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.46 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.58, 30.19, 19.18] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 54.1195 |
| Grand average of hydropathicity (GRAVY): | -0.15 |