Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5052 |
| Number of amino acids: | 673 |
| Molecular Weight: | 75295.34 Da |
| Theoretical pI: | 8.92 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 42 | 6.24% |
| Cysteine CYS (C) | 16 | 2.38% |
| Glutamic Acid GLU (E) | 32 | 4.75% |
| Aspartic Acid ASP (D) | 29 | 4.31% |
| Glycine GLY (G) | 40 | 5.94% |
| Phynylalanine PHE (F) | 28 | 4.16% |
| Isoleucine ILE (I) | 51 | 7.58% |
| Histidine HIS (H) | 10 | 1.49% |
| Lysine LYS (K) | 37 | 5.5% |
| Methionine MET (M) | 14 | 2.08% |
| Leucine LEU (L) | 60 | 8.92% |
| Asparagine ASN (N) | 37 | 5.5% |
| Glutamine GLN (Q) | 26 | 3.86% |
| Proline PRO (P) | 37 | 5.5% |
| Serine SER (S) | 62 | 9.21% |
| Arginine ARG (R) | 37 | 5.5% |
| Threonine THR (T) | 43 | 6.39% |
| Tryptophan TRP (W) | 9 | 1.34% |
| Valine VAL (V) | 37 | 5.5% |
| Tyrosine TYR (Y) | 26 | 3.86% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3361 |
| Hydrogen | H | 5295 |
| Nitrogen | N | 913 |
| Oxygen | O | 990 |
| Sulphur | S | 30 |
| Formula | C3361H5295N913O990S30 |
| Total Number of Atoms: | 10589 |
| Total number of positively charged residues (ARG + LYS): | 74 |
| Total number of negatively charged residues (ASP + GLU): | 61 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 89240 Absorption 0.1% (=1 g/l) 1.185, assuming all pairs of CYS residues form cystines Ext. coefficient 88240 Absorption 0.1% (=1 g/l) 1.172, assuming all CYS residues are reduced |
| Aromaticity: | 0.094 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 50.45 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.35, 26.15, 21.99] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 86.5082 |
| Grand average of hydropathicity (GRAVY): | -0.21 |