Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5051 |
| Number of amino acids: | 348 |
| Molecular Weight: | 37460.11 Da |
| Theoretical pI: | 4.47 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 6.32% |
| Cysteine CYS (C) | 9 | 2.59% |
| Glutamic Acid GLU (E) | 21 | 6.03% |
| Aspartic Acid ASP (D) | 21 | 6.03% |
| Glycine GLY (G) | 29 | 8.33% |
| Phynylalanine PHE (F) | 19 | 5.46% |
| Isoleucine ILE (I) | 13 | 3.74% |
| Histidine HIS (H) | 4 | 1.15% |
| Lysine LYS (K) | 9 | 2.59% |
| Methionine MET (M) | 9 | 2.59% |
| Leucine LEU (L) | 37 | 10.63% |
| Asparagine ASN (N) | 19 | 5.46% |
| Glutamine GLN (Q) | 13 | 3.74% |
| Proline PRO (P) | 17 | 4.89% |
| Serine SER (S) | 37 | 10.63% |
| Arginine ARG (R) | 13 | 3.74% |
| Threonine THR (T) | 24 | 6.9% |
| Tryptophan TRP (W) | 2 | 0.57% |
| Valine VAL (V) | 25 | 7.18% |
| Tyrosine TYR (Y) | 5 | 1.44% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1637 |
| Hydrogen | H | 2570 |
| Nitrogen | N | 438 |
| Oxygen | O | 531 |
| Sulphur | S | 18 |
| Formula | C1637H2570N438O531S18 |
| Total Number of Atoms: | 5194 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 42 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 18950 Absorption 0.1% (=1 g/l) 0.506, assuming all pairs of CYS residues form cystines Ext. coefficient 18450 Absorption 0.1% (=1 g/l) 0.493, assuming all CYS residues are reduced |
| Aromaticity: | 0.075 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.55 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.02, 29.31, 25.57] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.1897 |
| Grand average of hydropathicity (GRAVY): | -0.06 |