Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5031 |
| Number of amino acids: | 397 |
| Molecular Weight: | 44803.74 Da |
| Theoretical pI: | 5.61 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 7.56% |
| Cysteine CYS (C) | 5 | 1.26% |
| Glutamic Acid GLU (E) | 20 | 5.04% |
| Aspartic Acid ASP (D) | 26 | 6.55% |
| Glycine GLY (G) | 31 | 7.81% |
| Phynylalanine PHE (F) | 19 | 4.79% |
| Isoleucine ILE (I) | 22 | 5.54% |
| Histidine HIS (H) | 10 | 2.52% |
| Lysine LYS (K) | 21 | 5.29% |
| Methionine MET (M) | 13 | 3.27% |
| Leucine LEU (L) | 32 | 8.06% |
| Asparagine ASN (N) | 21 | 5.29% |
| Glutamine GLN (Q) | 16 | 4.03% |
| Proline PRO (P) | 10 | 2.52% |
| Serine SER (S) | 31 | 7.81% |
| Arginine ARG (R) | 16 | 4.03% |
| Threonine THR (T) | 17 | 4.28% |
| Tryptophan TRP (W) | 12 | 3.02% |
| Valine VAL (V) | 28 | 7.05% |
| Tyrosine TYR (Y) | 17 | 4.28% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2013 |
| Hydrogen | H | 3059 |
| Nitrogen | N | 535 |
| Oxygen | O | 592 |
| Sulphur | S | 18 |
| Formula | C2013H3059N535O592S18 |
| Total Number of Atoms: | 6217 |
| Total number of positively charged residues (ARG + LYS): | 37 |
| Total number of negatively charged residues (ASP + GLU): | 46 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 91580 Absorption 0.1% (=1 g/l) 2.044, assuming all pairs of CYS residues form cystines Ext. coefficient 91330 Absorption 0.1% (=1 g/l) 2.038, assuming all CYS residues are reduced |
| Aromaticity: | 0.121 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 29.40 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.75, 23.43, 23.93] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.0579 |
| Grand average of hydropathicity (GRAVY): | -0.23 |