Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5021 |
| Number of amino acids: | 1051 |
| Molecular Weight: | 115147.9 Da |
| Theoretical pI: | 8.55 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 60 | 5.71% |
| Cysteine CYS (C) | 10 | 0.95% |
| Glutamic Acid GLU (E) | 70 | 6.66% |
| Aspartic Acid ASP (D) | 43 | 4.09% |
| Glycine GLY (G) | 35 | 3.33% |
| Phynylalanine PHE (F) | 42 | 4% |
| Isoleucine ILE (I) | 36 | 3.43% |
| Histidine HIS (H) | 16 | 1.52% |
| Lysine LYS (K) | 57 | 5.42% |
| Methionine MET (M) | 19 | 1.81% |
| Leucine LEU (L) | 105 | 9.99% |
| Asparagine ASN (N) | 51 | 4.85% |
| Glutamine GLN (Q) | 33 | 3.14% |
| Proline PRO (P) | 105 | 9.99% |
| Serine SER (S) | 171 | 16.27% |
| Arginine ARG (R) | 62 | 5.9% |
| Threonine THR (T) | 56 | 5.33% |
| Tryptophan TRP (W) | 4 | 0.38% |
| Valine VAL (V) | 61 | 5.8% |
| Tyrosine TYR (Y) | 15 | 1.43% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 5046 |
| Hydrogen | H | 8078 |
| Nitrogen | N | 1414 |
| Oxygen | O | 1604 |
| Sulphur | S | 29 |
| Formula | C5046H8078N1414O1604S29 |
| Total Number of Atoms: | 16171 |
| Total number of positively charged residues (ARG + LYS): | 119 |
| Total number of negatively charged residues (ASP + GLU): | 113 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 44975 Absorption 0.1% (=1 g/l) 0.391, assuming all pairs of CYS residues form cystines Ext. coefficient 44350 Absorption 0.1% (=1 g/l) 0.385, assuming all CYS residues are reduced |
| Aromaticity: | 0.058 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 75.25 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.02, 34.44, 24.17] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.8621 |
| Grand average of hydropathicity (GRAVY): | -0.49 |