Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5018 |
| Number of amino acids: | 401 |
| Molecular Weight: | 45910.83 Da |
| Theoretical pI: | 4.59 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 7.48% |
| Cysteine CYS (C) | 3 | 0.75% |
| Glutamic Acid GLU (E) | 45 | 11.22% |
| Aspartic Acid ASP (D) | 50 | 12.47% |
| Glycine GLY (G) | 20 | 4.99% |
| Phynylalanine PHE (F) | 14 | 3.49% |
| Isoleucine ILE (I) | 21 | 5.24% |
| Histidine HIS (H) | 6 | 1.5% |
| Lysine LYS (K) | 52 | 12.97% |
| Methionine MET (M) | 4 | 1% |
| Leucine LEU (L) | 22 | 5.49% |
| Asparagine ASN (N) | 7 | 1.75% |
| Glutamine GLN (Q) | 11 | 2.74% |
| Proline PRO (P) | 24 | 5.99% |
| Serine SER (S) | 20 | 4.99% |
| Arginine ARG (R) | 7 | 1.75% |
| Threonine THR (T) | 24 | 5.99% |
| Tryptophan TRP (W) | 12 | 2.99% |
| Valine VAL (V) | 15 | 3.74% |
| Tyrosine TYR (Y) | 14 | 3.49% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2050 |
| Hydrogen | H | 3124 |
| Nitrogen | N | 516 |
| Oxygen | O | 668 |
| Sulphur | S | 7 |
| Formula | C2050H3124N516O668S7 |
| Total Number of Atoms: | 6365 |
| Total number of positively charged residues (ARG + LYS): | 59 |
| Total number of negatively charged residues (ASP + GLU): | 95 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 86985 Absorption 0.1% (=1 g/l) 1.895, assuming all pairs of CYS residues form cystines Ext. coefficient 86860 Absorption 0.1% (=1 g/l) 1.892, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.16 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.44, 17.71, 25.19] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 60.1496 |
| Grand average of hydropathicity (GRAVY): | -1.02 |