Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5014 |
| Number of amino acids: | 296 |
| Molecular Weight: | 34291.07 Da |
| Theoretical pI: | 9.04 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 7.43% |
| Cysteine CYS (C) | 4 | 1.35% |
| Glutamic Acid GLU (E) | 10 | 3.38% |
| Aspartic Acid ASP (D) | 18 | 6.08% |
| Glycine GLY (G) | 20 | 6.76% |
| Phynylalanine PHE (F) | 21 | 7.09% |
| Isoleucine ILE (I) | 13 | 4.39% |
| Histidine HIS (H) | 6 | 2.03% |
| Lysine LYS (K) | 17 | 5.74% |
| Methionine MET (M) | 11 | 3.72% |
| Leucine LEU (L) | 19 | 6.42% |
| Asparagine ASN (N) | 15 | 5.07% |
| Glutamine GLN (Q) | 13 | 4.39% |
| Proline PRO (P) | 14 | 4.73% |
| Serine SER (S) | 17 | 5.74% |
| Arginine ARG (R) | 17 | 5.74% |
| Threonine THR (T) | 19 | 6.42% |
| Tryptophan TRP (W) | 12 | 4.05% |
| Valine VAL (V) | 15 | 5.07% |
| Tyrosine TYR (Y) | 13 | 4.39% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1562 |
| Hydrogen | H | 2324 |
| Nitrogen | N | 416 |
| Oxygen | O | 430 |
| Sulphur | S | 15 |
| Formula | C1562H2324N416O430S15 |
| Total Number of Atoms: | 4747 |
| Total number of positively charged residues (ARG + LYS): | 34 |
| Total number of negatively charged residues (ASP + GLU): | 28 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 85620 Absorption 0.1% (=1 g/l) 2.497, assuming all pairs of CYS residues form cystines Ext. coefficient 85370 Absorption 0.1% (=1 g/l) 2.490, assuming all CYS residues are reduced |
| Aromaticity: | 0.155 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.29 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.42, 22.30, 20.95] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 64.2905 |
| Grand average of hydropathicity (GRAVY): | -0.41 |