Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4999 |
| Number of amino acids: | 264 |
| Molecular Weight: | 29736.98 Da |
| Theoretical pI: | 6.18 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 4.55% |
| Cysteine CYS (C) | 5 | 1.89% |
| Glutamic Acid GLU (E) | 13 | 4.92% |
| Aspartic Acid ASP (D) | 12 | 4.55% |
| Glycine GLY (G) | 24 | 9.09% |
| Phynylalanine PHE (F) | 13 | 4.92% |
| Isoleucine ILE (I) | 7 | 2.65% |
| Histidine HIS (H) | 7 | 2.65% |
| Lysine LYS (K) | 9 | 3.41% |
| Methionine MET (M) | 5 | 1.89% |
| Leucine LEU (L) | 22 | 8.33% |
| Asparagine ASN (N) | 20 | 7.58% |
| Glutamine GLN (Q) | 11 | 4.17% |
| Proline PRO (P) | 9 | 3.41% |
| Serine SER (S) | 27 | 10.23% |
| Arginine ARG (R) | 13 | 4.92% |
| Threonine THR (T) | 17 | 6.44% |
| Tryptophan TRP (W) | 5 | 1.89% |
| Valine VAL (V) | 16 | 6.06% |
| Tyrosine TYR (Y) | 17 | 6.44% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1319 |
| Hydrogen | H | 1976 |
| Nitrogen | N | 362 |
| Oxygen | O | 407 |
| Sulphur | S | 10 |
| Formula | C1319H1976N362O407S10 |
| Total Number of Atoms: | 4074 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 25 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 53080 Absorption 0.1% (=1 g/l) 1.785, assuming all pairs of CYS residues form cystines Ext. coefficient 52830 Absorption 0.1% (=1 g/l) 1.777, assuming all CYS residues are reduced |
| Aromaticity: | 0.133 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.97 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.30, 30.30, 19.70] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 64.9621 |
| Grand average of hydropathicity (GRAVY): | -0.51 |