Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4998 |
| Number of amino acids: | 626 |
| Molecular Weight: | 71345.21 Da |
| Theoretical pI: | 6.65 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 5.27% |
| Cysteine CYS (C) | 7 | 1.12% |
| Glutamic Acid GLU (E) | 68 | 10.86% |
| Aspartic Acid ASP (D) | 30 | 4.79% |
| Glycine GLY (G) | 45 | 7.19% |
| Phynylalanine PHE (F) | 22 | 3.51% |
| Isoleucine ILE (I) | 25 | 3.99% |
| Histidine HIS (H) | 15 | 2.4% |
| Lysine LYS (K) | 36 | 5.75% |
| Methionine MET (M) | 8 | 1.28% |
| Leucine LEU (L) | 43 | 6.87% |
| Asparagine ASN (N) | 41 | 6.55% |
| Glutamine GLN (Q) | 43 | 6.87% |
| Proline PRO (P) | 38 | 6.07% |
| Serine SER (S) | 45 | 7.19% |
| Arginine ARG (R) | 59 | 9.42% |
| Threonine THR (T) | 21 | 3.35% |
| Tryptophan TRP (W) | 5 | 0.8% |
| Valine VAL (V) | 33 | 5.27% |
| Tyrosine TYR (Y) | 9 | 1.44% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3065 |
| Hydrogen | H | 4882 |
| Nitrogen | N | 958 |
| Oxygen | O | 982 |
| Sulphur | S | 15 |
| Formula | C3065H4882N958O982S15 |
| Total Number of Atoms: | 9902 |
| Total number of positively charged residues (ARG + LYS): | 95 |
| Total number of negatively charged residues (ASP + GLU): | 98 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 41285 Absorption 0.1% (=1 g/l) 0.579, assuming all pairs of CYS residues form cystines Ext. coefficient 40910 Absorption 0.1% (=1 g/l) 0.573, assuming all CYS residues are reduced |
| Aromaticity: | 0.058 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 63.10 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [21.89, 27.00, 24.28] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 62.9233 |
| Grand average of hydropathicity (GRAVY): | -1.07 |