Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4997 |
| Number of amino acids: | 625 |
| Molecular Weight: | 69875.4 Da |
| Theoretical pI: | 7.35 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 44 | 7.04% |
| Cysteine CYS (C) | 36 | 5.76% |
| Glutamic Acid GLU (E) | 34 | 5.44% |
| Aspartic Acid ASP (D) | 39 | 6.24% |
| Glycine GLY (G) | 51 | 8.16% |
| Phynylalanine PHE (F) | 20 | 3.2% |
| Isoleucine ILE (I) | 40 | 6.4% |
| Histidine HIS (H) | 7 | 1.12% |
| Lysine LYS (K) | 36 | 5.76% |
| Methionine MET (M) | 9 | 1.44% |
| Leucine LEU (L) | 38 | 6.08% |
| Asparagine ASN (N) | 33 | 5.28% |
| Glutamine GLN (Q) | 27 | 4.32% |
| Proline PRO (P) | 25 | 4% |
| Serine SER (S) | 34 | 5.44% |
| Arginine ARG (R) | 38 | 6.08% |
| Threonine THR (T) | 38 | 6.08% |
| Tryptophan TRP (W) | 15 | 2.4% |
| Valine VAL (V) | 38 | 6.08% |
| Tyrosine TYR (Y) | 23 | 3.68% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3055 |
| Hydrogen | H | 4768 |
| Nitrogen | N | 864 |
| Oxygen | O | 927 |
| Sulphur | S | 45 |
| Formula | C3055H4768N864O927S45 |
| Total Number of Atoms: | 9659 |
| Total number of positively charged residues (ARG + LYS): | 74 |
| Total number of negatively charged residues (ASP + GLU): | 73 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 119020 Absorption 0.1% (=1 g/l) 1.703, assuming all pairs of CYS residues form cystines Ext. coefficient 116770 Absorption 0.1% (=1 g/l) 1.671, assuming all CYS residues are reduced |
| Aromaticity: | 0.093 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.22 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.84, 22.88, 20.00] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.344 |
| Grand average of hydropathicity (GRAVY): | -0.37 |