Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4992 |
| Number of amino acids: | 620 |
| Molecular Weight: | 69202.42 Da |
| Theoretical pI: | 8.78 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 5.16% |
| Cysteine CYS (C) | 21 | 3.39% |
| Glutamic Acid GLU (E) | 32 | 5.16% |
| Aspartic Acid ASP (D) | 27 | 4.35% |
| Glycine GLY (G) | 41 | 6.61% |
| Phynylalanine PHE (F) | 33 | 5.32% |
| Isoleucine ILE (I) | 38 | 6.13% |
| Histidine HIS (H) | 17 | 2.74% |
| Lysine LYS (K) | 38 | 6.13% |
| Methionine MET (M) | 10 | 1.61% |
| Leucine LEU (L) | 58 | 9.35% |
| Asparagine ASN (N) | 33 | 5.32% |
| Glutamine GLN (Q) | 21 | 3.39% |
| Proline PRO (P) | 25 | 4.03% |
| Serine SER (S) | 58 | 9.35% |
| Arginine ARG (R) | 33 | 5.32% |
| Threonine THR (T) | 34 | 5.48% |
| Tryptophan TRP (W) | 4 | 0.65% |
| Valine VAL (V) | 46 | 7.42% |
| Tyrosine TYR (Y) | 19 | 3.06% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3077 |
| Hydrogen | H | 4857 |
| Nitrogen | N | 849 |
| Oxygen | O | 904 |
| Sulphur | S | 31 |
| Formula | C3077H4857N849O904S31 |
| Total Number of Atoms: | 9718 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 59 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 51560 Absorption 0.1% (=1 g/l) 0.745, assuming all pairs of CYS residues form cystines Ext. coefficient 50310 Absorption 0.1% (=1 g/l) 0.727, assuming all CYS residues are reduced |
| Aromaticity: | 0.090 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.56 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.94, 25.32, 21.29] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.0645 |
| Grand average of hydropathicity (GRAVY): | -0.15 |