Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4989 |
| Number of amino acids: | 448 |
| Molecular Weight: | 50622.24 Da |
| Theoretical pI: | 5.96 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 35 | 7.81% |
| Cysteine CYS (C) | 5 | 1.12% |
| Glutamic Acid GLU (E) | 21 | 4.69% |
| Aspartic Acid ASP (D) | 25 | 5.58% |
| Glycine GLY (G) | 29 | 6.47% |
| Phynylalanine PHE (F) | 28 | 6.25% |
| Isoleucine ILE (I) | 15 | 3.35% |
| Histidine HIS (H) | 8 | 1.79% |
| Lysine LYS (K) | 20 | 4.46% |
| Methionine MET (M) | 15 | 3.35% |
| Leucine LEU (L) | 37 | 8.26% |
| Asparagine ASN (N) | 28 | 6.25% |
| Glutamine GLN (Q) | 21 | 4.69% |
| Proline PRO (P) | 16 | 3.57% |
| Serine SER (S) | 36 | 8.04% |
| Arginine ARG (R) | 21 | 4.69% |
| Threonine THR (T) | 27 | 6.03% |
| Tryptophan TRP (W) | 13 | 2.9% |
| Valine VAL (V) | 33 | 7.37% |
| Tyrosine TYR (Y) | 15 | 3.35% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2272 |
| Hydrogen | H | 3447 |
| Nitrogen | N | 609 |
| Oxygen | O | 668 |
| Sulphur | S | 20 |
| Formula | C2272H3447N609O668S20 |
| Total Number of Atoms: | 7016 |
| Total number of positively charged residues (ARG + LYS): | 41 |
| Total number of negatively charged residues (ASP + GLU): | 46 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 94100 Absorption 0.1% (=1 g/l) 1.859, assuming all pairs of CYS residues form cystines Ext. coefficient 93850 Absorption 0.1% (=1 g/l) 1.854, assuming all CYS residues are reduced |
| Aromaticity: | 0.125 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.39 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.47, 24.33, 24.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.4419 |
| Grand average of hydropathicity (GRAVY): | -0.26 |