Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4985 |
| Number of amino acids: | 525 |
| Molecular Weight: | 57868.46 Da |
| Theoretical pI: | 6.83 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 42 | 8% |
| Cysteine CYS (C) | 5 | 0.95% |
| Glutamic Acid GLU (E) | 19 | 3.62% |
| Aspartic Acid ASP (D) | 38 | 7.24% |
| Glycine GLY (G) | 42 | 8% |
| Phynylalanine PHE (F) | 26 | 4.95% |
| Isoleucine ILE (I) | 20 | 3.81% |
| Histidine HIS (H) | 9 | 1.71% |
| Lysine LYS (K) | 42 | 8% |
| Methionine MET (M) | 10 | 1.9% |
| Leucine LEU (L) | 51 | 9.71% |
| Asparagine ASN (N) | 25 | 4.76% |
| Glutamine GLN (Q) | 14 | 2.67% |
| Proline PRO (P) | 26 | 4.95% |
| Serine SER (S) | 48 | 9.14% |
| Arginine ARG (R) | 14 | 2.67% |
| Threonine THR (T) | 34 | 6.48% |
| Tryptophan TRP (W) | 13 | 2.48% |
| Valine VAL (V) | 27 | 5.14% |
| Tyrosine TYR (Y) | 20 | 3.81% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2610 |
| Hydrogen | H | 4001 |
| Nitrogen | N | 679 |
| Oxygen | O | 781 |
| Sulphur | S | 15 |
| Formula | C2610H4001N679O781S15 |
| Total Number of Atoms: | 8086 |
| Total number of positively charged residues (ARG + LYS): | 56 |
| Total number of negatively charged residues (ASP + GLU): | 57 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 101550 Absorption 0.1% (=1 g/l) 1.755, assuming all pairs of CYS residues form cystines Ext. coefficient 101300 Absorption 0.1% (=1 g/l) 1.751, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.60 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.90, 26.86, 23.24] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.6572 |
| Grand average of hydropathicity (GRAVY): | -0.33 |