Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4977 |
| Number of amino acids: | 324 |
| Molecular Weight: | 34673.87 Da |
| Theoretical pI: | 4.69 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 26 | 8.02% |
| Cysteine CYS (C) | 8 | 2.47% |
| Glutamic Acid GLU (E) | 6 | 1.85% |
| Aspartic Acid ASP (D) | 26 | 8.02% |
| Glycine GLY (G) | 31 | 9.57% |
| Phynylalanine PHE (F) | 23 | 7.1% |
| Isoleucine ILE (I) | 19 | 5.86% |
| Histidine HIS (H) | 3 | 0.93% |
| Lysine LYS (K) | 8 | 2.47% |
| Methionine MET (M) | 5 | 1.54% |
| Leucine LEU (L) | 28 | 8.64% |
| Asparagine ASN (N) | 23 | 7.1% |
| Glutamine GLN (Q) | 17 | 5.25% |
| Proline PRO (P) | 11 | 3.4% |
| Serine SER (S) | 23 | 7.1% |
| Arginine ARG (R) | 14 | 4.32% |
| Threonine THR (T) | 29 | 8.95% |
| Tryptophan TRP (W) | 1 | 0.31% |
| Valine VAL (V) | 20 | 6.17% |
| Tyrosine TYR (Y) | 3 | 0.93% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1517 |
| Hydrogen | H | 2377 |
| Nitrogen | N | 421 |
| Oxygen | O | 484 |
| Sulphur | S | 13 |
| Formula | C1517H2377N421O484S13 |
| Total Number of Atoms: | 4812 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 32 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 10470 Absorption 0.1% (=1 g/l) 0.302, assuming all pairs of CYS residues form cystines Ext. coefficient 9970 Absorption 0.1% (=1 g/l) 0.288, assuming all CYS residues are reduced |
| Aromaticity: | 0.083 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.95 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.01, 27.16, 20.06] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.5 |
| Grand average of hydropathicity (GRAVY): | -0.04 |