Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4975 |
| Number of amino acids: | 402 |
| Molecular Weight: | 43766.71 Da |
| Theoretical pI: | 5.41 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 7.46% |
| Cysteine CYS (C) | 8 | 1.99% |
| Glutamic Acid GLU (E) | 14 | 3.48% |
| Aspartic Acid ASP (D) | 17 | 4.23% |
| Glycine GLY (G) | 22 | 5.47% |
| Phynylalanine PHE (F) | 19 | 4.73% |
| Isoleucine ILE (I) | 15 | 3.73% |
| Histidine HIS (H) | 10 | 2.49% |
| Lysine LYS (K) | 14 | 3.48% |
| Methionine MET (M) | 14 | 3.48% |
| Leucine LEU (L) | 38 | 9.45% |
| Asparagine ASN (N) | 25 | 6.22% |
| Glutamine GLN (Q) | 11 | 2.74% |
| Proline PRO (P) | 26 | 6.47% |
| Serine SER (S) | 46 | 11.44% |
| Arginine ARG (R) | 7 | 1.74% |
| Threonine THR (T) | 32 | 7.96% |
| Tryptophan TRP (W) | 4 | 1% |
| Valine VAL (V) | 32 | 7.96% |
| Tyrosine TYR (Y) | 18 | 4.48% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1958 |
| Hydrogen | H | 3007 |
| Nitrogen | N | 497 |
| Oxygen | O | 597 |
| Sulphur | S | 22 |
| Formula | C1958H3007N497O597S22 |
| Total Number of Atoms: | 6081 |
| Total number of positively charged residues (ARG + LYS): | 21 |
| Total number of negatively charged residues (ASP + GLU): | 31 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 49320 Absorption 0.1% (=1 g/l) 1.127, assuming all pairs of CYS residues form cystines Ext. coefficient 48820 Absorption 0.1% (=1 g/l) 1.115, assuming all CYS residues are reduced |
| Aromaticity: | 0.102 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.42 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.34, 29.60, 23.88] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 81.9652 |
| Grand average of hydropathicity (GRAVY): | 0.03 |