Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4967 |
| Number of amino acids: | 495 |
| Molecular Weight: | 55164.49 Da |
| Theoretical pI: | 5.78 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 6.67% |
| Cysteine CYS (C) | 9 | 1.82% |
| Glutamic Acid GLU (E) | 31 | 6.26% |
| Aspartic Acid ASP (D) | 27 | 5.45% |
| Glycine GLY (G) | 41 | 8.28% |
| Phynylalanine PHE (F) | 12 | 2.42% |
| Isoleucine ILE (I) | 24 | 4.85% |
| Histidine HIS (H) | 15 | 3.03% |
| Lysine LYS (K) | 29 | 5.86% |
| Methionine MET (M) | 19 | 3.84% |
| Leucine LEU (L) | 36 | 7.27% |
| Asparagine ASN (N) | 28 | 5.66% |
| Glutamine GLN (Q) | 16 | 3.23% |
| Proline PRO (P) | 22 | 4.44% |
| Serine SER (S) | 37 | 7.47% |
| Arginine ARG (R) | 18 | 3.64% |
| Threonine THR (T) | 23 | 4.65% |
| Tryptophan TRP (W) | 8 | 1.62% |
| Valine VAL (V) | 40 | 8.08% |
| Tyrosine TYR (Y) | 27 | 5.45% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2442 |
| Hydrogen | H | 3774 |
| Nitrogen | N | 660 |
| Oxygen | O | 743 |
| Sulphur | S | 28 |
| Formula | C2442H3774N660O743S28 |
| Total Number of Atoms: | 7647 |
| Total number of positively charged residues (ARG + LYS): | 47 |
| Total number of negatively charged residues (ASP + GLU): | 58 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 84730 Absorption 0.1% (=1 g/l) 1.536, assuming all pairs of CYS residues form cystines Ext. coefficient 84230 Absorption 0.1% (=1 g/l) 1.527, assuming all CYS residues are reduced |
| Aromaticity: | 0.095 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.35 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.70, 25.86, 24.04] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.3737 |
| Grand average of hydropathicity (GRAVY): | -0.35 |