Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4951 |
| Number of amino acids: | 659 |
| Molecular Weight: | 73568.66 Da |
| Theoretical pI: | 5.57 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 37 | 5.61% |
| Cysteine CYS (C) | 14 | 2.12% |
| Glutamic Acid GLU (E) | 48 | 7.28% |
| Aspartic Acid ASP (D) | 29 | 4.4% |
| Glycine GLY (G) | 52 | 7.89% |
| Phynylalanine PHE (F) | 34 | 5.16% |
| Isoleucine ILE (I) | 45 | 6.83% |
| Histidine HIS (H) | 8 | 1.21% |
| Lysine LYS (K) | 32 | 4.86% |
| Methionine MET (M) | 16 | 2.43% |
| Leucine LEU (L) | 57 | 8.65% |
| Asparagine ASN (N) | 37 | 5.61% |
| Glutamine GLN (Q) | 24 | 3.64% |
| Proline PRO (P) | 23 | 3.49% |
| Serine SER (S) | 58 | 8.8% |
| Arginine ARG (R) | 35 | 5.31% |
| Threonine THR (T) | 37 | 5.61% |
| Tryptophan TRP (W) | 8 | 1.21% |
| Valine VAL (V) | 43 | 6.53% |
| Tyrosine TYR (Y) | 22 | 3.34% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3267 |
| Hydrogen | H | 5115 |
| Nitrogen | N | 881 |
| Oxygen | O | 992 |
| Sulphur | S | 30 |
| Formula | C3267H5115N881O992S30 |
| Total Number of Atoms: | 10285 |
| Total number of positively charged residues (ARG + LYS): | 67 |
| Total number of negatively charged residues (ASP + GLU): | 77 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 77655 Absorption 0.1% (=1 g/l) 1.056, assuming all pairs of CYS residues form cystines Ext. coefficient 76780 Absorption 0.1% (=1 g/l) 1.044, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.43 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.71, 25.80, 23.98] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.9014 |
| Grand average of hydropathicity (GRAVY): | -0.20 |