Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4950 |
| Number of amino acids: | 416 |
| Molecular Weight: | 43489.79 Da |
| Theoretical pI: | 4.85 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 9.13% |
| Cysteine CYS (C) | 16 | 3.85% |
| Glutamic Acid GLU (E) | 8 | 1.92% |
| Aspartic Acid ASP (D) | 21 | 5.05% |
| Glycine GLY (G) | 27 | 6.49% |
| Phynylalanine PHE (F) | 14 | 3.37% |
| Isoleucine ILE (I) | 30 | 7.21% |
| Histidine HIS (H) | 3 | 0.72% |
| Lysine LYS (K) | 10 | 2.4% |
| Methionine MET (M) | 8 | 1.92% |
| Leucine LEU (L) | 43 | 10.34% |
| Asparagine ASN (N) | 21 | 5.05% |
| Glutamine GLN (Q) | 10 | 2.4% |
| Proline PRO (P) | 33 | 7.93% |
| Serine SER (S) | 56 | 13.46% |
| Arginine ARG (R) | 11 | 2.64% |
| Threonine THR (T) | 26 | 6.25% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 27 | 6.49% |
| Tyrosine TYR (Y) | 14 | 3.37% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1920 |
| Hydrogen | H | 3056 |
| Nitrogen | N | 496 |
| Oxygen | O | 602 |
| Sulphur | S | 24 |
| Formula | C1920H3056N496O602S24 |
| Total Number of Atoms: | 6098 |
| Total number of positively charged residues (ARG + LYS): | 21 |
| Total number of negatively charged residues (ASP + GLU): | 29 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 21860 Absorption 0.1% (=1 g/l) 0.503, assuming all pairs of CYS residues form cystines Ext. coefficient 20860 Absorption 0.1% (=1 g/l) 0.480, assuming all CYS residues are reduced |
| Aromaticity: | 0.067 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.03 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.77, 32.93, 23.32] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 96.3941 |
| Grand average of hydropathicity (GRAVY): | 0.29 |