Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4949 |
| Number of amino acids: | 720 |
| Molecular Weight: | 81160.3 Da |
| Theoretical pI: | 8.32 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 4.44% |
| Cysteine CYS (C) | 28 | 3.89% |
| Glutamic Acid GLU (E) | 46 | 6.39% |
| Aspartic Acid ASP (D) | 30 | 4.17% |
| Glycine GLY (G) | 46 | 6.39% |
| Phynylalanine PHE (F) | 33 | 4.58% |
| Isoleucine ILE (I) | 40 | 5.56% |
| Histidine HIS (H) | 18 | 2.5% |
| Lysine LYS (K) | 44 | 6.11% |
| Methionine MET (M) | 17 | 2.36% |
| Leucine LEU (L) | 77 | 10.69% |
| Asparagine ASN (N) | 40 | 5.56% |
| Glutamine GLN (Q) | 29 | 4.03% |
| Proline PRO (P) | 30 | 4.17% |
| Serine SER (S) | 62 | 8.61% |
| Arginine ARG (R) | 39 | 5.42% |
| Threonine THR (T) | 34 | 4.72% |
| Tryptophan TRP (W) | 5 | 0.69% |
| Valine VAL (V) | 46 | 6.39% |
| Tyrosine TYR (Y) | 24 | 3.33% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3590 |
| Hydrogen | H | 5681 |
| Nitrogen | N | 991 |
| Oxygen | O | 1062 |
| Sulphur | S | 45 |
| Formula | C3590H5681N991O1062S45 |
| Total Number of Atoms: | 11369 |
| Total number of positively charged residues (ARG + LYS): | 83 |
| Total number of negatively charged residues (ASP + GLU): | 76 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 65010 Absorption 0.1% (=1 g/l) 0.801, assuming all pairs of CYS residues form cystines Ext. coefficient 63260 Absorption 0.1% (=1 g/l) 0.779, assuming all CYS residues are reduced |
| Aromaticity: | 0.086 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.23 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.25, 24.72, 23.89] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 86.3471 |
| Grand average of hydropathicity (GRAVY): | -0.24 |