Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4944 |
| Number of amino acids: | 265 |
| Molecular Weight: | 29722.48 Da |
| Theoretical pI: | 6.75 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 5.28% |
| Cysteine CYS (C) | 10 | 3.77% |
| Glutamic Acid GLU (E) | 12 | 4.53% |
| Aspartic Acid ASP (D) | 7 | 2.64% |
| Glycine GLY (G) | 8 | 3.02% |
| Phynylalanine PHE (F) | 18 | 6.79% |
| Isoleucine ILE (I) | 13 | 4.91% |
| Histidine HIS (H) | 1 | 0.38% |
| Lysine LYS (K) | 4 | 1.51% |
| Methionine MET (M) | 4 | 1.51% |
| Leucine LEU (L) | 26 | 9.81% |
| Asparagine ASN (N) | 19 | 7.17% |
| Glutamine GLN (Q) | 13 | 4.91% |
| Proline PRO (P) | 16 | 6.04% |
| Serine SER (S) | 36 | 13.58% |
| Arginine ARG (R) | 15 | 5.66% |
| Threonine THR (T) | 26 | 9.81% |
| Tryptophan TRP (W) | 1 | 0.38% |
| Valine VAL (V) | 10 | 3.77% |
| Tyrosine TYR (Y) | 12 | 4.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1314 |
| Hydrogen | H | 2027 |
| Nitrogen | N | 349 |
| Oxygen | O | 410 |
| Sulphur | S | 14 |
| Formula | C1314H2027N349O410S14 |
| Total Number of Atoms: | 4114 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 24005 Absorption 0.1% (=1 g/l) 0.808, assuming all pairs of CYS residues form cystines Ext. coefficient 23380 Absorption 0.1% (=1 g/l) 0.787, assuming all CYS residues are reduced |
| Aromaticity: | 0.117 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 58.82 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.19, 29.81, 21.13] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.6226 |
| Grand average of hydropathicity (GRAVY): | -0.19 |