Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4935 |
| Number of amino acids: | 269 |
| Molecular Weight: | 30755.67 Da |
| Theoretical pI: | 8.39 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 5.2% |
| Cysteine CYS (C) | 2 | 0.74% |
| Glutamic Acid GLU (E) | 9 | 3.35% |
| Aspartic Acid ASP (D) | 17 | 6.32% |
| Glycine GLY (G) | 18 | 6.69% |
| Phynylalanine PHE (F) | 18 | 6.69% |
| Isoleucine ILE (I) | 12 | 4.46% |
| Histidine HIS (H) | 4 | 1.49% |
| Lysine LYS (K) | 19 | 7.06% |
| Methionine MET (M) | 8 | 2.97% |
| Leucine LEU (L) | 20 | 7.43% |
| Asparagine ASN (N) | 18 | 6.69% |
| Glutamine GLN (Q) | 11 | 4.09% |
| Proline PRO (P) | 12 | 4.46% |
| Serine SER (S) | 23 | 8.55% |
| Arginine ARG (R) | 9 | 3.35% |
| Threonine THR (T) | 23 | 8.55% |
| Tryptophan TRP (W) | 9 | 3.35% |
| Valine VAL (V) | 11 | 4.09% |
| Tyrosine TYR (Y) | 12 | 4.46% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1393 |
| Hydrogen | H | 2087 |
| Nitrogen | N | 361 |
| Oxygen | O | 409 |
| Sulphur | S | 10 |
| Formula | C1393H2087N361O409S10 |
| Total Number of Atoms: | 4260 |
| Total number of positively charged residues (ARG + LYS): | 28 |
| Total number of negatively charged residues (ASP + GLU): | 26 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 67505 Absorption 0.1% (=1 g/l) 2.195, assuming all pairs of CYS residues form cystines Ext. coefficient 67380 Absorption 0.1% (=1 g/l) 2.191, assuming all CYS residues are reduced |
| Aromaticity: | 0.145 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.96 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.48, 26.39, 18.96] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 63.4572 |
| Grand average of hydropathicity (GRAVY): | -0.49 |