Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4923 |
| Number of amino acids: | 586 |
| Molecular Weight: | 64149.19 Da |
| Theoretical pI: | 8.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 41 | 7% |
| Cysteine CYS (C) | 8 | 1.37% |
| Glutamic Acid GLU (E) | 26 | 4.44% |
| Aspartic Acid ASP (D) | 38 | 6.48% |
| Glycine GLY (G) | 36 | 6.14% |
| Phynylalanine PHE (F) | 21 | 3.58% |
| Isoleucine ILE (I) | 40 | 6.83% |
| Histidine HIS (H) | 9 | 1.54% |
| Lysine LYS (K) | 47 | 8.02% |
| Methionine MET (M) | 12 | 2.05% |
| Leucine LEU (L) | 42 | 7.17% |
| Asparagine ASN (N) | 22 | 3.75% |
| Glutamine GLN (Q) | 19 | 3.24% |
| Proline PRO (P) | 25 | 4.27% |
| Serine SER (S) | 61 | 10.41% |
| Arginine ARG (R) | 22 | 3.75% |
| Threonine THR (T) | 47 | 8.02% |
| Tryptophan TRP (W) | 8 | 1.37% |
| Valine VAL (V) | 48 | 8.19% |
| Tyrosine TYR (Y) | 14 | 2.39% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2843 |
| Hydrogen | H | 4548 |
| Nitrogen | N | 766 |
| Oxygen | O | 878 |
| Sulphur | S | 20 |
| Formula | C2843H4548N766O878S20 |
| Total Number of Atoms: | 9055 |
| Total number of positively charged residues (ARG + LYS): | 69 |
| Total number of negatively charged residues (ASP + GLU): | 64 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 65360 Absorption 0.1% (=1 g/l) 1.019, assuming all pairs of CYS residues form cystines Ext. coefficient 64860 Absorption 0.1% (=1 g/l) 1.011, assuming all CYS residues are reduced |
| Aromaticity: | 0.073 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.27 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.52, 24.57, 20.65] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.3243 |
| Grand average of hydropathicity (GRAVY): | -0.21 |