Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4922 |
| Number of amino acids: | 335 |
| Molecular Weight: | 36183.7 Da |
| Theoretical pI: | 7.87 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 9.55% |
| Cysteine CYS (C) | 17 | 5.07% |
| Glutamic Acid GLU (E) | 10 | 2.99% |
| Aspartic Acid ASP (D) | 15 | 4.48% |
| Glycine GLY (G) | 41 | 12.24% |
| Phynylalanine PHE (F) | 17 | 5.07% |
| Isoleucine ILE (I) | 14 | 4.18% |
| Histidine HIS (H) | 4 | 1.19% |
| Lysine LYS (K) | 12 | 3.58% |
| Methionine MET (M) | 5 | 1.49% |
| Leucine LEU (L) | 22 | 6.57% |
| Asparagine ASN (N) | 20 | 5.97% |
| Glutamine GLN (Q) | 17 | 5.07% |
| Proline PRO (P) | 24 | 7.16% |
| Serine SER (S) | 20 | 5.97% |
| Arginine ARG (R) | 15 | 4.48% |
| Threonine THR (T) | 19 | 5.67% |
| Tryptophan TRP (W) | 8 | 2.39% |
| Valine VAL (V) | 9 | 2.69% |
| Tyrosine TYR (Y) | 14 | 4.18% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1599 |
| Hydrogen | H | 2405 |
| Nitrogen | N | 445 |
| Oxygen | O | 476 |
| Sulphur | S | 22 |
| Formula | C1599H2405N445O476S22 |
| Total Number of Atoms: | 4947 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 25 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 65860 Absorption 0.1% (=1 g/l) 1.820, assuming all pairs of CYS residues form cystines Ext. coefficient 64860 Absorption 0.1% (=1 g/l) 1.793, assuming all CYS residues are reduced |
| Aromaticity: | 0.116 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.44 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.07, 31.34, 20.60] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 59.2537 |
| Grand average of hydropathicity (GRAVY): | -0.33 |