Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4918 |
| Number of amino acids: | 423 |
| Molecular Weight: | 44151.64 Da |
| Theoretical pI: | 4.98 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 7.57% |
| Cysteine CYS (C) | 18 | 4.26% |
| Glutamic Acid GLU (E) | 10 | 2.36% |
| Aspartic Acid ASP (D) | 19 | 4.49% |
| Glycine GLY (G) | 30 | 7.09% |
| Phynylalanine PHE (F) | 13 | 3.07% |
| Isoleucine ILE (I) | 28 | 6.62% |
| Histidine HIS (H) | 3 | 0.71% |
| Lysine LYS (K) | 14 | 3.31% |
| Methionine MET (M) | 10 | 2.36% |
| Leucine LEU (L) | 45 | 10.64% |
| Asparagine ASN (N) | 19 | 4.49% |
| Glutamine GLN (Q) | 9 | 2.13% |
| Proline PRO (P) | 36 | 8.51% |
| Serine SER (S) | 62 | 14.66% |
| Arginine ARG (R) | 8 | 1.89% |
| Threonine THR (T) | 27 | 6.38% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 25 | 5.91% |
| Tyrosine TYR (Y) | 15 | 3.55% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1946 |
| Hydrogen | H | 3099 |
| Nitrogen | N | 495 |
| Oxygen | O | 614 |
| Sulphur | S | 28 |
| Formula | C1946H3099N495O614S28 |
| Total Number of Atoms: | 6182 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 29 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 23475 Absorption 0.1% (=1 g/l) 0.532, assuming all pairs of CYS residues form cystines Ext. coefficient 22350 Absorption 0.1% (=1 g/l) 0.506, assuming all CYS residues are reduced |
| Aromaticity: | 0.066 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.62 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.79, 34.75, 22.93] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 92.0095 |
| Grand average of hydropathicity (GRAVY): | 0.24 |