Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4912 |
| Number of amino acids: | 259 |
| Molecular Weight: | 29072.67 Da |
| Theoretical pI: | 9.13 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 17 | 6.56% |
| Cysteine CYS (C) | 12 | 4.63% |
| Glutamic Acid GLU (E) | 10 | 3.86% |
| Aspartic Acid ASP (D) | 11 | 4.25% |
| Glycine GLY (G) | 14 | 5.41% |
| Phynylalanine PHE (F) | 9 | 3.47% |
| Isoleucine ILE (I) | 14 | 5.41% |
| Histidine HIS (H) | 3 | 1.16% |
| Lysine LYS (K) | 24 | 9.27% |
| Methionine MET (M) | 8 | 3.09% |
| Leucine LEU (L) | 25 | 9.65% |
| Asparagine ASN (N) | 13 | 5.02% |
| Glutamine GLN (Q) | 6 | 2.32% |
| Proline PRO (P) | 7 | 2.7% |
| Serine SER (S) | 31 | 11.97% |
| Arginine ARG (R) | 10 | 3.86% |
| Threonine THR (T) | 10 | 3.86% |
| Tryptophan TRP (W) | 1 | 0.39% |
| Valine VAL (V) | 15 | 5.79% |
| Tyrosine TYR (Y) | 19 | 7.34% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1293 |
| Hydrogen | H | 2041 |
| Nitrogen | N | 339 |
| Oxygen | O | 381 |
| Sulphur | S | 20 |
| Formula | C1293H2041N339O381S20 |
| Total Number of Atoms: | 4074 |
| Total number of positively charged residues (ARG + LYS): | 34 |
| Total number of negatively charged residues (ASP + GLU): | 21 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 34560 Absorption 0.1% (=1 g/l) 1.189, assuming all pairs of CYS residues form cystines Ext. coefficient 33810 Absorption 0.1% (=1 g/l) 1.163, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.01 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.05, 25.10, 23.17] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.085 |
| Grand average of hydropathicity (GRAVY): | -0.16 |