Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4911 |
| Number of amino acids: | 249 |
| Molecular Weight: | 26427.7 Da |
| Theoretical pI: | 9.24 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 23 | 9.24% |
| Cysteine CYS (C) | 8 | 3.21% |
| Glutamic Acid GLU (E) | 3 | 1.2% |
| Aspartic Acid ASP (D) | 5 | 2.01% |
| Glycine GLY (G) | 38 | 15.26% |
| Phynylalanine PHE (F) | 13 | 5.22% |
| Isoleucine ILE (I) | 10 | 4.02% |
| Histidine HIS (H) | 5 | 2.01% |
| Lysine LYS (K) | 3 | 1.2% |
| Methionine MET (M) | 6 | 2.41% |
| Leucine LEU (L) | 14 | 5.62% |
| Asparagine ASN (N) | 20 | 8.03% |
| Glutamine GLN (Q) | 10 | 4.02% |
| Proline PRO (P) | 9 | 3.61% |
| Serine SER (S) | 21 | 8.43% |
| Arginine ARG (R) | 13 | 5.22% |
| Threonine THR (T) | 14 | 5.62% |
| Tryptophan TRP (W) | 7 | 2.81% |
| Valine VAL (V) | 17 | 6.83% |
| Tyrosine TYR (Y) | 10 | 4.02% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1167 |
| Hydrogen | H | 1758 |
| Nitrogen | N | 338 |
| Oxygen | O | 341 |
| Sulphur | S | 14 |
| Formula | C1167H1758N338O341S14 |
| Total Number of Atoms: | 3618 |
| Total number of positively charged residues (ARG + LYS): | 16 |
| Total number of negatively charged residues (ASP + GLU): | 8 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 53900 Absorption 0.1% (=1 g/l) 2.040, assuming all pairs of CYS residues form cystines Ext. coefficient 53400 Absorption 0.1% (=1 g/l) 2.021, assuming all CYS residues are reduced |
| Aromaticity: | 0.120 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.18 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.51, 35.34, 18.47] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 66.6265 |
| Grand average of hydropathicity (GRAVY): | -0.06 |