Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4908 |
| Number of amino acids: | 183 |
| Molecular Weight: | 19096.04 Da |
| Theoretical pI: | 4.36 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 17 | 9.29% |
| Cysteine CYS (C) | 11 | 6.01% |
| Glutamic Acid GLU (E) | 9 | 4.92% |
| Aspartic Acid ASP (D) | 15 | 8.2% |
| Glycine GLY (G) | 21 | 11.48% |
| Phynylalanine PHE (F) | 1 | 0.55% |
| Isoleucine ILE (I) | 5 | 2.73% |
| Histidine HIS (H) | 3 | 1.64% |
| Lysine LYS (K) | 3 | 1.64% |
| Methionine MET (M) | 4 | 2.19% |
| Leucine LEU (L) | 11 | 6.01% |
| Asparagine ASN (N) | 7 | 3.83% |
| Glutamine GLN (Q) | 5 | 2.73% |
| Proline PRO (P) | 9 | 4.92% |
| Serine SER (S) | 18 | 9.84% |
| Arginine ARG (R) | 8 | 4.37% |
| Threonine THR (T) | 13 | 7.1% |
| Tryptophan TRP (W) | 3 | 1.64% |
| Valine VAL (V) | 14 | 7.65% |
| Tyrosine TYR (Y) | 6 | 3.28% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 801 |
| Hydrogen | H | 1253 |
| Nitrogen | N | 231 |
| Oxygen | O | 281 |
| Sulphur | S | 15 |
| Formula | C801H1253N231O281S15 |
| Total Number of Atoms: | 2581 |
| Total number of positively charged residues (ARG + LYS): | 11 |
| Total number of negatively charged residues (ASP + GLU): | 24 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 26065 Absorption 0.1% (=1 g/l) 1.365, assuming all pairs of CYS residues form cystines Ext. coefficient 25440 Absorption 0.1% (=1 g/l) 1.332, assuming all CYS residues are reduced |
| Aromaticity: | 0.055 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 48.86 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [21.86, 30.05, 22.40] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 65.5738 |
| Grand average of hydropathicity (GRAVY): | -0.27 |