Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4901 |
| Number of amino acids: | 668 |
| Molecular Weight: | 73848.77 Da |
| Theoretical pI: | 9.13 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 46 | 6.89% |
| Cysteine CYS (C) | 20 | 2.99% |
| Glutamic Acid GLU (E) | 17 | 2.54% |
| Aspartic Acid ASP (D) | 37 | 5.54% |
| Glycine GLY (G) | 53 | 7.93% |
| Phynylalanine PHE (F) | 32 | 4.79% |
| Isoleucine ILE (I) | 39 | 5.84% |
| Histidine HIS (H) | 10 | 1.5% |
| Lysine LYS (K) | 51 | 7.63% |
| Methionine MET (M) | 15 | 2.25% |
| Leucine LEU (L) | 55 | 8.23% |
| Asparagine ASN (N) | 42 | 6.29% |
| Glutamine GLN (Q) | 26 | 3.89% |
| Proline PRO (P) | 47 | 7.04% |
| Serine SER (S) | 40 | 5.99% |
| Arginine ARG (R) | 24 | 3.59% |
| Threonine THR (T) | 51 | 7.63% |
| Tryptophan TRP (W) | 13 | 1.95% |
| Valine VAL (V) | 29 | 4.34% |
| Tyrosine TYR (Y) | 21 | 3.14% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3308 |
| Hydrogen | H | 5148 |
| Nitrogen | N | 892 |
| Oxygen | O | 957 |
| Sulphur | S | 35 |
| Formula | C3308H5148N892O957S35 |
| Total Number of Atoms: | 10340 |
| Total number of positively charged residues (ARG + LYS): | 75 |
| Total number of negatively charged residues (ASP + GLU): | 54 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 104040 Absorption 0.1% (=1 g/l) 1.409, assuming all pairs of CYS residues form cystines Ext. coefficient 102790 Absorption 0.1% (=1 g/l) 1.392, assuming all CYS residues are reduced |
| Aromaticity: | 0.099 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.26 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.29, 27.25, 19.91] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.3563 |
| Grand average of hydropathicity (GRAVY): | -0.32 |