Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4893 |
| Number of amino acids: | 262 |
| Molecular Weight: | 28413.92 Da |
| Theoretical pI: | 4.9 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 21 | 8.02% |
| Cysteine CYS (C) | 2 | 0.76% |
| Glutamic Acid GLU (E) | 9 | 3.44% |
| Aspartic Acid ASP (D) | 16 | 6.11% |
| Glycine GLY (G) | 14 | 5.34% |
| Phynylalanine PHE (F) | 14 | 5.34% |
| Isoleucine ILE (I) | 10 | 3.82% |
| Histidine HIS (H) | 5 | 1.91% |
| Lysine LYS (K) | 11 | 4.2% |
| Methionine MET (M) | 1 | 0.38% |
| Leucine LEU (L) | 35 | 13.36% |
| Asparagine ASN (N) | 21 | 8.02% |
| Glutamine GLN (Q) | 9 | 3.44% |
| Proline PRO (P) | 9 | 3.44% |
| Serine SER (S) | 32 | 12.21% |
| Arginine ARG (R) | 5 | 1.91% |
| Threonine THR (T) | 17 | 6.49% |
| Tryptophan TRP (W) | 4 | 1.53% |
| Valine VAL (V) | 21 | 8.02% |
| Tyrosine TYR (Y) | 6 | 2.29% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1274 |
| Hydrogen | H | 1982 |
| Nitrogen | N | 332 |
| Oxygen | O | 398 |
| Sulphur | S | 3 |
| Formula | C1274H1982N332O398S3 |
| Total Number of Atoms: | 3989 |
| Total number of positively charged residues (ARG + LYS): | 16 |
| Total number of negatively charged residues (ASP + GLU): | 25 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 31065 Absorption 0.1% (=1 g/l) 1.093, assuming all pairs of CYS residues form cystines Ext. coefficient 30940 Absorption 0.1% (=1 g/l) 1.089, assuming all CYS residues are reduced |
| Aromaticity: | 0.092 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.10 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.35, 29.01, 25.19] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 98.2444 |
| Grand average of hydropathicity (GRAVY): | 0.03 |