Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4892 |
| Number of amino acids: | 433 |
| Molecular Weight: | 47028.45 Da |
| Theoretical pI: | 6.27 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 6.47% |
| Cysteine CYS (C) | 23 | 5.31% |
| Glutamic Acid GLU (E) | 20 | 4.62% |
| Aspartic Acid ASP (D) | 19 | 4.39% |
| Glycine GLY (G) | 16 | 3.7% |
| Phynylalanine PHE (F) | 15 | 3.46% |
| Isoleucine ILE (I) | 27 | 6.24% |
| Histidine HIS (H) | 8 | 1.85% |
| Lysine LYS (K) | 24 | 5.54% |
| Methionine MET (M) | 10 | 2.31% |
| Leucine LEU (L) | 57 | 13.16% |
| Asparagine ASN (N) | 25 | 5.77% |
| Glutamine GLN (Q) | 17 | 3.93% |
| Proline PRO (P) | 26 | 6% |
| Serine SER (S) | 51 | 11.78% |
| Arginine ARG (R) | 12 | 2.77% |
| Threonine THR (T) | 28 | 6.47% |
| Tryptophan TRP (W) | 3 | 0.69% |
| Valine VAL (V) | 22 | 5.08% |
| Tyrosine TYR (Y) | 2 | 0.46% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2055 |
| Hydrogen | H | 3342 |
| Nitrogen | N | 554 |
| Oxygen | O | 635 |
| Sulphur | S | 33 |
| Formula | C2055H3342N554O635S33 |
| Total Number of Atoms: | 6619 |
| Total number of positively charged residues (ARG + LYS): | 36 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 20855 Absorption 0.1% (=1 g/l) 0.443, assuming all pairs of CYS residues form cystines Ext. coefficient 19480 Absorption 0.1% (=1 g/l) 0.414, assuming all CYS residues are reduced |
| Aromaticity: | 0.046 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 53.64 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.10, 27.25, 26.56] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 96.8592 |
| Grand average of hydropathicity (GRAVY): | 0.07 |