Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4888 |
| Number of amino acids: | 669 |
| Molecular Weight: | 74089.6 Da |
| Theoretical pI: | 6.14 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 37 | 5.53% |
| Cysteine CYS (C) | 18 | 2.69% |
| Glutamic Acid GLU (E) | 35 | 5.23% |
| Aspartic Acid ASP (D) | 35 | 5.23% |
| Glycine GLY (G) | 45 | 6.73% |
| Phynylalanine PHE (F) | 37 | 5.53% |
| Isoleucine ILE (I) | 46 | 6.88% |
| Histidine HIS (H) | 10 | 1.49% |
| Lysine LYS (K) | 32 | 4.78% |
| Methionine MET (M) | 16 | 2.39% |
| Leucine LEU (L) | 55 | 8.22% |
| Asparagine ASN (N) | 27 | 4.04% |
| Glutamine GLN (Q) | 20 | 2.99% |
| Proline PRO (P) | 36 | 5.38% |
| Serine SER (S) | 69 | 10.31% |
| Arginine ARG (R) | 33 | 4.93% |
| Threonine THR (T) | 47 | 7.03% |
| Tryptophan TRP (W) | 6 | 0.9% |
| Valine VAL (V) | 43 | 6.43% |
| Tyrosine TYR (Y) | 22 | 3.29% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3301 |
| Hydrogen | H | 5163 |
| Nitrogen | N | 873 |
| Oxygen | O | 995 |
| Sulphur | S | 34 |
| Formula | C3301H5163N873O995S34 |
| Total Number of Atoms: | 10366 |
| Total number of positively charged residues (ARG + LYS): | 65 |
| Total number of negatively charged residues (ASP + GLU): | 70 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 66905 Absorption 0.1% (=1 g/l) 0.903, assuming all pairs of CYS residues form cystines Ext. coefficient 65780 Absorption 0.1% (=1 g/l) 0.888, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.28 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.24, 26.46, 21.38] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.0493 |
| Grand average of hydropathicity (GRAVY): | -0.10 |