Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4872 |
| Number of amino acids: | 130 |
| Molecular Weight: | 14517.86 Da |
| Theoretical pI: | 9.44 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 10.77% |
| Cysteine CYS (C) | 6 | 4.62% |
| Glutamic Acid GLU (E) | 3 | 2.31% |
| Aspartic Acid ASP (D) | 7 | 5.38% |
| Glycine GLY (G) | 9 | 6.92% |
| Phynylalanine PHE (F) | 5 | 3.85% |
| Isoleucine ILE (I) | 8 | 6.15% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 5 | 3.85% |
| Methionine MET (M) | 3 | 2.31% |
| Leucine LEU (L) | 5 | 3.85% |
| Asparagine ASN (N) | 8 | 6.15% |
| Glutamine GLN (Q) | 4 | 3.08% |
| Proline PRO (P) | 5 | 3.85% |
| Serine SER (S) | 2 | 1.54% |
| Arginine ARG (R) | 13 | 10% |
| Threonine THR (T) | 8 | 6.15% |
| Tryptophan TRP (W) | 1 | 0.77% |
| Valine VAL (V) | 17 | 13.08% |
| Tyrosine TYR (Y) | 7 | 5.38% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 641 |
| Hydrogen | H | 1023 |
| Nitrogen | N | 187 |
| Oxygen | O | 180 |
| Sulphur | S | 9 |
| Formula | C641H1023N187O180S9 |
| Total Number of Atoms: | 2040 |
| Total number of positively charged residues (ARG + LYS): | 18 |
| Total number of negatively charged residues (ASP + GLU): | 10 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 16305 Absorption 0.1% (=1 g/l) 1.123, assuming all pairs of CYS residues form cystines Ext. coefficient 15930 Absorption 0.1% (=1 g/l) 1.097, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.43 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.08, 18.46, 19.23] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.6922 |
| Grand average of hydropathicity (GRAVY): | 0.02 |