Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4866 |
| Number of amino acids: | 254 |
| Molecular Weight: | 29360.99 Da |
| Theoretical pI: | 9.22 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 11 | 4.33% |
| Cysteine CYS (C) | 12 | 4.72% |
| Glutamic Acid GLU (E) | 12 | 4.72% |
| Aspartic Acid ASP (D) | 10 | 3.94% |
| Glycine GLY (G) | 13 | 5.12% |
| Phynylalanine PHE (F) | 10 | 3.94% |
| Isoleucine ILE (I) | 14 | 5.51% |
| Histidine HIS (H) | 4 | 1.57% |
| Lysine LYS (K) | 16 | 6.3% |
| Methionine MET (M) | 7 | 2.76% |
| Leucine LEU (L) | 32 | 12.6% |
| Asparagine ASN (N) | 16 | 6.3% |
| Glutamine GLN (Q) | 8 | 3.15% |
| Proline PRO (P) | 8 | 3.15% |
| Serine SER (S) | 23 | 9.06% |
| Arginine ARG (R) | 19 | 7.48% |
| Threonine THR (T) | 12 | 4.72% |
| Tryptophan TRP (W) | 2 | 0.79% |
| Valine VAL (V) | 9 | 3.54% |
| Tyrosine TYR (Y) | 16 | 6.3% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1302 |
| Hydrogen | H | 2057 |
| Nitrogen | N | 361 |
| Oxygen | O | 374 |
| Sulphur | S | 19 |
| Formula | C1302H2057N361O374S19 |
| Total Number of Atoms: | 4113 |
| Total number of positively charged residues (ARG + LYS): | 35 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 35590 Absorption 0.1% (=1 g/l) 1.212, assuming all pairs of CYS residues form cystines Ext. coefficient 34840 Absorption 0.1% (=1 g/l) 1.187, assuming all CYS residues are reduced |
| Aromaticity: | 0.110 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 54.45 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.68, 23.62, 24.41] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.2361 |
| Grand average of hydropathicity (GRAVY): | -0.30 |