Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4864 |
| Number of amino acids: | 636 |
| Molecular Weight: | 71782.71 Da |
| Theoretical pI: | 8.99 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 4.87% |
| Cysteine CYS (C) | 17 | 2.67% |
| Glutamic Acid GLU (E) | 28 | 4.4% |
| Aspartic Acid ASP (D) | 30 | 4.72% |
| Glycine GLY (G) | 44 | 6.92% |
| Phynylalanine PHE (F) | 32 | 5.03% |
| Isoleucine ILE (I) | 46 | 7.23% |
| Histidine HIS (H) | 12 | 1.89% |
| Lysine LYS (K) | 29 | 4.56% |
| Methionine MET (M) | 11 | 1.73% |
| Leucine LEU (L) | 62 | 9.75% |
| Asparagine ASN (N) | 36 | 5.66% |
| Glutamine GLN (Q) | 21 | 3.3% |
| Proline PRO (P) | 25 | 3.93% |
| Serine SER (S) | 45 | 7.08% |
| Arginine ARG (R) | 43 | 6.76% |
| Threonine THR (T) | 42 | 6.6% |
| Tryptophan TRP (W) | 9 | 1.42% |
| Valine VAL (V) | 50 | 7.86% |
| Tyrosine TYR (Y) | 23 | 3.62% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3220 |
| Hydrogen | H | 5068 |
| Nitrogen | N | 884 |
| Oxygen | O | 920 |
| Sulphur | S | 28 |
| Formula | C3220H5068N884O920S28 |
| Total Number of Atoms: | 10120 |
| Total number of positively charged residues (ARG + LYS): | 72 |
| Total number of negatively charged residues (ASP + GLU): | 58 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 84770 Absorption 0.1% (=1 g/l) 1.181, assuming all pairs of CYS residues form cystines Ext. coefficient 83770 Absorption 0.1% (=1 g/l) 1.167, assuming all CYS residues are reduced |
| Aromaticity: | 0.101 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.44 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.91, 23.58, 20.75] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 93.8994 |
| Grand average of hydropathicity (GRAVY): | -0.07 |