Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4850 |
| Number of amino acids: | 431 |
| Molecular Weight: | 48514.96 Da |
| Theoretical pI: | 9.13 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 5.1% |
| Cysteine CYS (C) | 18 | 4.18% |
| Glutamic Acid GLU (E) | 6 | 1.39% |
| Aspartic Acid ASP (D) | 18 | 4.18% |
| Glycine GLY (G) | 28 | 6.5% |
| Phynylalanine PHE (F) | 29 | 6.73% |
| Isoleucine ILE (I) | 19 | 4.41% |
| Histidine HIS (H) | 9 | 2.09% |
| Lysine LYS (K) | 32 | 7.42% |
| Methionine MET (M) | 11 | 2.55% |
| Leucine LEU (L) | 31 | 7.19% |
| Asparagine ASN (N) | 27 | 6.26% |
| Glutamine GLN (Q) | 19 | 4.41% |
| Proline PRO (P) | 29 | 6.73% |
| Serine SER (S) | 28 | 6.5% |
| Arginine ARG (R) | 9 | 2.09% |
| Threonine THR (T) | 40 | 9.28% |
| Tryptophan TRP (W) | 13 | 3.02% |
| Valine VAL (V) | 27 | 6.26% |
| Tyrosine TYR (Y) | 16 | 3.71% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2208 |
| Hydrogen | H | 3337 |
| Nitrogen | N | 567 |
| Oxygen | O | 610 |
| Sulphur | S | 29 |
| Formula | C2208H3337N567O610S29 |
| Total Number of Atoms: | 6751 |
| Total number of positively charged residues (ARG + LYS): | 41 |
| Total number of negatively charged residues (ASP + GLU): | 24 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 96465 Absorption 0.1% (=1 g/l) 1.988, assuming all pairs of CYS residues form cystines Ext. coefficient 95340 Absorption 0.1% (=1 g/l) 1.965, assuming all CYS residues are reduced |
| Aromaticity: | 0.135 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.00 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.32, 25.99, 16.24] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 68.5151 |
| Grand average of hydropathicity (GRAVY): | -0.18 |