Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4843 |
| Number of amino acids: | 506 |
| Molecular Weight: | 55603.88 Da |
| Theoretical pI: | 7.97 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 7.71% |
| Cysteine CYS (C) | 10 | 1.98% |
| Glutamic Acid GLU (E) | 14 | 2.77% |
| Aspartic Acid ASP (D) | 26 | 5.14% |
| Glycine GLY (G) | 30 | 5.93% |
| Phynylalanine PHE (F) | 25 | 4.94% |
| Isoleucine ILE (I) | 26 | 5.14% |
| Histidine HIS (H) | 5 | 0.99% |
| Lysine LYS (K) | 26 | 5.14% |
| Methionine MET (M) | 10 | 1.98% |
| Leucine LEU (L) | 46 | 9.09% |
| Asparagine ASN (N) | 36 | 7.11% |
| Glutamine GLN (Q) | 19 | 3.75% |
| Proline PRO (P) | 25 | 4.94% |
| Serine SER (S) | 59 | 11.66% |
| Arginine ARG (R) | 16 | 3.16% |
| Threonine THR (T) | 33 | 6.52% |
| Tryptophan TRP (W) | 6 | 1.19% |
| Valine VAL (V) | 30 | 5.93% |
| Tyrosine TYR (Y) | 25 | 4.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2484 |
| Hydrogen | H | 3835 |
| Nitrogen | N | 651 |
| Oxygen | O | 759 |
| Sulphur | S | 20 |
| Formula | C2484H3835N651O759S20 |
| Total Number of Atoms: | 7749 |
| Total number of positively charged residues (ARG + LYS): | 42 |
| Total number of negatively charged residues (ASP + GLU): | 40 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 70875 Absorption 0.1% (=1 g/l) 1.275, assuming all pairs of CYS residues form cystines Ext. coefficient 70250 Absorption 0.1% (=1 g/l) 1.263, assuming all CYS residues are reduced |
| Aromaticity: | 0.111 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.01 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.23, 29.64, 21.54] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.3953 |
| Grand average of hydropathicity (GRAVY): | -0.16 |