Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4837 |
| Number of amino acids: | 279 |
| Molecular Weight: | 30528.11 Da |
| Theoretical pI: | 5.26 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 5.38% |
| Cysteine CYS (C) | 13 | 4.66% |
| Glutamic Acid GLU (E) | 10 | 3.58% |
| Aspartic Acid ASP (D) | 19 | 6.81% |
| Glycine GLY (G) | 19 | 6.81% |
| Phynylalanine PHE (F) | 17 | 6.09% |
| Isoleucine ILE (I) | 10 | 3.58% |
| Histidine HIS (H) | 3 | 1.08% |
| Lysine LYS (K) | 11 | 3.94% |
| Methionine MET (M) | 2 | 0.72% |
| Leucine LEU (L) | 27 | 9.68% |
| Asparagine ASN (N) | 9 | 3.23% |
| Glutamine GLN (Q) | 7 | 2.51% |
| Proline PRO (P) | 7 | 2.51% |
| Serine SER (S) | 51 | 18.28% |
| Arginine ARG (R) | 13 | 4.66% |
| Threonine THR (T) | 11 | 3.94% |
| Tryptophan TRP (W) | 1 | 0.36% |
| Valine VAL (V) | 18 | 6.45% |
| Tyrosine TYR (Y) | 16 | 5.73% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1343 |
| Hydrogen | H | 2058 |
| Nitrogen | N | 352 |
| Oxygen | O | 432 |
| Sulphur | S | 15 |
| Formula | C1343H2058N352O432S15 |
| Total Number of Atoms: | 4200 |
| Total number of positively charged residues (ARG + LYS): | 24 |
| Total number of negatively charged residues (ASP + GLU): | 29 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 30090 Absorption 0.1% (=1 g/l) 0.986, assuming all pairs of CYS residues form cystines Ext. coefficient 29340 Absorption 0.1% (=1 g/l) 0.961, assuming all CYS residues are reduced |
| Aromaticity: | 0.122 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.09 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.90, 30.82, 19.35] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.8064 |
| Grand average of hydropathicity (GRAVY): | -0.08 |