Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4836 |
| Number of amino acids: | 618 |
| Molecular Weight: | 69256.98 Da |
| Theoretical pI: | 5.64 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 5.18% |
| Cysteine CYS (C) | 34 | 5.5% |
| Glutamic Acid GLU (E) | 44 | 7.12% |
| Aspartic Acid ASP (D) | 38 | 6.15% |
| Glycine GLY (G) | 47 | 7.61% |
| Phynylalanine PHE (F) | 24 | 3.88% |
| Isoleucine ILE (I) | 40 | 6.47% |
| Histidine HIS (H) | 5 | 0.81% |
| Lysine LYS (K) | 50 | 8.09% |
| Methionine MET (M) | 13 | 2.1% |
| Leucine LEU (L) | 46 | 7.44% |
| Asparagine ASN (N) | 34 | 5.5% |
| Glutamine GLN (Q) | 20 | 3.24% |
| Proline PRO (P) | 20 | 3.24% |
| Serine SER (S) | 49 | 7.93% |
| Arginine ARG (R) | 25 | 4.05% |
| Threonine THR (T) | 28 | 4.53% |
| Tryptophan TRP (W) | 11 | 1.78% |
| Valine VAL (V) | 35 | 5.66% |
| Tyrosine TYR (Y) | 23 | 3.72% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3039 |
| Hydrogen | H | 4762 |
| Nitrogen | N | 818 |
| Oxygen | O | 937 |
| Sulphur | S | 47 |
| Formula | C3039H4762N818O937S47 |
| Total Number of Atoms: | 9603 |
| Total number of positively charged residues (ARG + LYS): | 75 |
| Total number of negatively charged residues (ASP + GLU): | 82 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 96895 Absorption 0.1% (=1 g/l) 1.399, assuming all pairs of CYS residues form cystines Ext. coefficient 94770 Absorption 0.1% (=1 g/l) 1.368, assuming all CYS residues are reduced |
| Aromaticity: | 0.094 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.44 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.96, 24.27, 21.84] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.8738 |
| Grand average of hydropathicity (GRAVY): | -0.34 |