Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4830 |
| Number of amino acids: | 368 |
| Molecular Weight: | 40290.92 Da |
| Theoretical pI: | 9.24 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 5.98% |
| Cysteine CYS (C) | 7 | 1.9% |
| Glutamic Acid GLU (E) | 18 | 4.89% |
| Aspartic Acid ASP (D) | 17 | 4.62% |
| Glycine GLY (G) | 29 | 7.88% |
| Phynylalanine PHE (F) | 16 | 4.35% |
| Isoleucine ILE (I) | 11 | 2.99% |
| Histidine HIS (H) | 10 | 2.72% |
| Lysine LYS (K) | 13 | 3.53% |
| Methionine MET (M) | 4 | 1.09% |
| Leucine LEU (L) | 30 | 8.15% |
| Asparagine ASN (N) | 12 | 3.26% |
| Glutamine GLN (Q) | 10 | 2.72% |
| Proline PRO (P) | 27 | 7.34% |
| Serine SER (S) | 33 | 8.97% |
| Arginine ARG (R) | 30 | 8.15% |
| Threonine THR (T) | 27 | 7.34% |
| Tryptophan TRP (W) | 6 | 1.63% |
| Valine VAL (V) | 42 | 11.41% |
| Tyrosine TYR (Y) | 4 | 1.09% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1783 |
| Hydrogen | H | 2831 |
| Nitrogen | N | 519 |
| Oxygen | O | 525 |
| Sulphur | S | 11 |
| Formula | C1783H2831N519O525S11 |
| Total Number of Atoms: | 5669 |
| Total number of positively charged residues (ARG + LYS): | 43 |
| Total number of negatively charged residues (ASP + GLU): | 35 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 39335 Absorption 0.1% (=1 g/l) 0.976, assuming all pairs of CYS residues form cystines Ext. coefficient 38960 Absorption 0.1% (=1 g/l) 0.967, assuming all CYS residues are reduced |
| Aromaticity: | 0.071 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 54.27 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.62, 27.45, 20.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.527 |
| Grand average of hydropathicity (GRAVY): | -0.21 |