Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4829 |
| Number of amino acids: | 786 |
| Molecular Weight: | 87304.45 Da |
| Theoretical pI: | 6.06 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 4.96% |
| Cysteine CYS (C) | 30 | 3.82% |
| Glutamic Acid GLU (E) | 55 | 7% |
| Aspartic Acid ASP (D) | 45 | 5.73% |
| Glycine GLY (G) | 58 | 7.38% |
| Phynylalanine PHE (F) | 28 | 3.56% |
| Isoleucine ILE (I) | 54 | 6.87% |
| Histidine HIS (H) | 14 | 1.78% |
| Lysine LYS (K) | 50 | 6.36% |
| Methionine MET (M) | 17 | 2.16% |
| Leucine LEU (L) | 60 | 7.63% |
| Asparagine ASN (N) | 36 | 4.58% |
| Glutamine GLN (Q) | 22 | 2.8% |
| Proline PRO (P) | 26 | 3.31% |
| Serine SER (S) | 73 | 9.29% |
| Arginine ARG (R) | 42 | 5.34% |
| Threonine THR (T) | 46 | 5.85% |
| Tryptophan TRP (W) | 7 | 0.89% |
| Valine VAL (V) | 59 | 7.51% |
| Tyrosine TYR (Y) | 25 | 3.18% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3819 |
| Hydrogen | H | 6079 |
| Nitrogen | N | 1055 |
| Oxygen | O | 1189 |
| Sulphur | S | 47 |
| Formula | C3819H6079N1055O1189S47 |
| Total Number of Atoms: | 12189 |
| Total number of positively charged residues (ARG + LYS): | 92 |
| Total number of negatively charged residues (ASP + GLU): | 100 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 77625 Absorption 0.1% (=1 g/l) 0.889, assuming all pairs of CYS residues form cystines Ext. coefficient 75750 Absorption 0.1% (=1 g/l) 0.868, assuming all CYS residues are reduced |
| Aromaticity: | 0.076 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.14 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.64, 24.55, 21.76] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.2952 |
| Grand average of hydropathicity (GRAVY): | -0.26 |