Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4827 |
| Number of amino acids: | 265 |
| Molecular Weight: | 29274.7 Da |
| Theoretical pI: | 5.9 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 19 | 7.17% |
| Cysteine CYS (C) | 2 | 0.75% |
| Glutamic Acid GLU (E) | 18 | 6.79% |
| Aspartic Acid ASP (D) | 11 | 4.15% |
| Glycine GLY (G) | 13 | 4.91% |
| Phynylalanine PHE (F) | 15 | 5.66% |
| Isoleucine ILE (I) | 13 | 4.91% |
| Histidine HIS (H) | 6 | 2.26% |
| Lysine LYS (K) | 14 | 5.28% |
| Methionine MET (M) | 2 | 0.75% |
| Leucine LEU (L) | 26 | 9.81% |
| Asparagine ASN (N) | 28 | 10.57% |
| Glutamine GLN (Q) | 2 | 0.75% |
| Proline PRO (P) | 7 | 2.64% |
| Serine SER (S) | 31 | 11.7% |
| Arginine ARG (R) | 11 | 4.15% |
| Threonine THR (T) | 19 | 7.17% |
| Tryptophan TRP (W) | 2 | 0.75% |
| Valine VAL (V) | 19 | 7.17% |
| Tyrosine TYR (Y) | 7 | 2.64% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1294 |
| Hydrogen | H | 2026 |
| Nitrogen | N | 356 |
| Oxygen | O | 411 |
| Sulphur | S | 4 |
| Formula | C1294H2026N356O411S4 |
| Total Number of Atoms: | 4091 |
| Total number of positively charged residues (ARG + LYS): | 25 |
| Total number of negatively charged residues (ASP + GLU): | 29 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 21555 Absorption 0.1% (=1 g/l) 0.736, assuming all pairs of CYS residues form cystines Ext. coefficient 21430 Absorption 0.1% (=1 g/l) 0.732, assuming all CYS residues are reduced |
| Aromaticity: | 0.091 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.21 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.94, 29.81, 24.53] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.3585 |
| Grand average of hydropathicity (GRAVY): | -0.28 |