Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4822 |
| Number of amino acids: | 334 |
| Molecular Weight: | 36220.7 Da |
| Theoretical pI: | 8.72 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 7.19% |
| Cysteine CYS (C) | 17 | 5.09% |
| Glutamic Acid GLU (E) | 7 | 2.1% |
| Aspartic Acid ASP (D) | 14 | 4.19% |
| Glycine GLY (G) | 39 | 11.68% |
| Phynylalanine PHE (F) | 14 | 4.19% |
| Isoleucine ILE (I) | 15 | 4.49% |
| Histidine HIS (H) | 4 | 1.2% |
| Lysine LYS (K) | 9 | 2.69% |
| Methionine MET (M) | 6 | 1.8% |
| Leucine LEU (L) | 20 | 5.99% |
| Asparagine ASN (N) | 19 | 5.69% |
| Glutamine GLN (Q) | 17 | 5.09% |
| Proline PRO (P) | 24 | 7.19% |
| Serine SER (S) | 29 | 8.68% |
| Arginine ARG (R) | 20 | 5.99% |
| Threonine THR (T) | 23 | 6.89% |
| Tryptophan TRP (W) | 7 | 2.1% |
| Valine VAL (V) | 11 | 3.29% |
| Tyrosine TYR (Y) | 15 | 4.49% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1583 |
| Hydrogen | H | 2412 |
| Nitrogen | N | 454 |
| Oxygen | O | 480 |
| Sulphur | S | 23 |
| Formula | C1583H2412N454O480S23 |
| Total Number of Atoms: | 4952 |
| Total number of positively charged residues (ARG + LYS): | 29 |
| Total number of negatively charged residues (ASP + GLU): | 21 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 61850 Absorption 0.1% (=1 g/l) 1.708, assuming all pairs of CYS residues form cystines Ext. coefficient 60850 Absorption 0.1% (=1 g/l) 1.680, assuming all CYS residues are reduced |
| Aromaticity: | 0.108 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.59 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.55, 33.23, 17.07] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 57.6048 |
| Grand average of hydropathicity (GRAVY): | -0.39 |