Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4820 |
| Number of amino acids: | 253 |
| Molecular Weight: | 27076.68 Da |
| Theoretical pI: | 9.32 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 25 | 9.88% |
| Cysteine CYS (C) | 10 | 3.95% |
| Glutamic Acid GLU (E) | 1 | 0.4% |
| Aspartic Acid ASP (D) | 6 | 2.37% |
| Glycine GLY (G) | 33 | 13.04% |
| Phynylalanine PHE (F) | 15 | 5.93% |
| Isoleucine ILE (I) | 8 | 3.16% |
| Histidine HIS (H) | 6 | 2.37% |
| Lysine LYS (K) | 5 | 1.98% |
| Methionine MET (M) | 7 | 2.77% |
| Leucine LEU (L) | 16 | 6.32% |
| Asparagine ASN (N) | 21 | 8.3% |
| Glutamine GLN (Q) | 12 | 4.74% |
| Proline PRO (P) | 10 | 3.95% |
| Serine SER (S) | 19 | 7.51% |
| Arginine ARG (R) | 12 | 4.74% |
| Threonine THR (T) | 14 | 5.53% |
| Tryptophan TRP (W) | 7 | 2.77% |
| Valine VAL (V) | 18 | 7.11% |
| Tyrosine TYR (Y) | 8 | 3.16% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1198 |
| Hydrogen | H | 1810 |
| Nitrogen | N | 346 |
| Oxygen | O | 342 |
| Sulphur | S | 17 |
| Formula | C1198H1810N346O342S17 |
| Total Number of Atoms: | 3713 |
| Total number of positively charged residues (ARG + LYS): | 17 |
| Total number of negatively charged residues (ASP + GLU): | 7 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 51045 Absorption 0.1% (=1 g/l) 1.885, assuming all pairs of CYS residues form cystines Ext. coefficient 50420 Absorption 0.1% (=1 g/l) 1.862, assuming all CYS residues are reduced |
| Aromaticity: | 0.119 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.37 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.46, 32.81, 19.37] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 67.5099 |
| Grand average of hydropathicity (GRAVY): | -0.02 |