Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4814 |
| Number of amino acids: | 362 |
| Molecular Weight: | 40290.27 Da |
| Theoretical pI: | 4.77 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 21 | 5.8% |
| Cysteine CYS (C) | 7 | 1.93% |
| Glutamic Acid GLU (E) | 28 | 7.73% |
| Aspartic Acid ASP (D) | 26 | 7.18% |
| Glycine GLY (G) | 31 | 8.56% |
| Phynylalanine PHE (F) | 14 | 3.87% |
| Isoleucine ILE (I) | 20 | 5.52% |
| Histidine HIS (H) | 3 | 0.83% |
| Lysine LYS (K) | 20 | 5.52% |
| Methionine MET (M) | 8 | 2.21% |
| Leucine LEU (L) | 27 | 7.46% |
| Asparagine ASN (N) | 22 | 6.08% |
| Glutamine GLN (Q) | 9 | 2.49% |
| Proline PRO (P) | 10 | 2.76% |
| Serine SER (S) | 28 | 7.73% |
| Arginine ARG (R) | 18 | 4.97% |
| Threonine THR (T) | 18 | 4.97% |
| Tryptophan TRP (W) | 6 | 1.66% |
| Valine VAL (V) | 32 | 8.84% |
| Tyrosine TYR (Y) | 14 | 3.87% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1775 |
| Hydrogen | H | 2767 |
| Nitrogen | N | 479 |
| Oxygen | O | 562 |
| Sulphur | S | 15 |
| Formula | C1775H2767N479O562S15 |
| Total Number of Atoms: | 5598 |
| Total number of positively charged residues (ARG + LYS): | 38 |
| Total number of negatively charged residues (ASP + GLU): | 54 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 54235 Absorption 0.1% (=1 g/l) 1.346, assuming all pairs of CYS residues form cystines Ext. coefficient 53860 Absorption 0.1% (=1 g/l) 1.337, assuming all CYS residues are reduced |
| Aromaticity: | 0.094 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.07 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.22, 25.14, 23.20] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.0718 |
| Grand average of hydropathicity (GRAVY): | -0.32 |