Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4812 |
| Number of amino acids: | 344 |
| Molecular Weight: | 38162.02 Da |
| Theoretical pI: | 5.19 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 5.23% |
| Cysteine CYS (C) | 3 | 0.87% |
| Glutamic Acid GLU (E) | 19 | 5.52% |
| Aspartic Acid ASP (D) | 22 | 6.4% |
| Glycine GLY (G) | 28 | 8.14% |
| Phynylalanine PHE (F) | 20 | 5.81% |
| Isoleucine ILE (I) | 18 | 5.23% |
| Histidine HIS (H) | 10 | 2.91% |
| Lysine LYS (K) | 20 | 5.81% |
| Methionine MET (M) | 4 | 1.16% |
| Leucine LEU (L) | 32 | 9.3% |
| Asparagine ASN (N) | 14 | 4.07% |
| Glutamine GLN (Q) | 11 | 3.2% |
| Proline PRO (P) | 17 | 4.94% |
| Serine SER (S) | 32 | 9.3% |
| Arginine ARG (R) | 8 | 2.33% |
| Threonine THR (T) | 20 | 5.81% |
| Tryptophan TRP (W) | 4 | 1.16% |
| Valine VAL (V) | 27 | 7.85% |
| Tyrosine TYR (Y) | 17 | 4.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1734 |
| Hydrogen | H | 2633 |
| Nitrogen | N | 437 |
| Oxygen | O | 521 |
| Sulphur | S | 7 |
| Formula | C1734H2633N437O521S7 |
| Total Number of Atoms: | 5332 |
| Total number of positively charged residues (ARG + LYS): | 28 |
| Total number of negatively charged residues (ASP + GLU): | 41 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 47455 Absorption 0.1% (=1 g/l) 1.244, assuming all pairs of CYS residues form cystines Ext. coefficient 47330 Absorption 0.1% (=1 g/l) 1.240, assuming all CYS residues are reduced |
| Aromaticity: | 0.119 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.75 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.30, 26.45, 21.22] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.6803 |
| Grand average of hydropathicity (GRAVY): | -0.18 |