Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4811 |
| Number of amino acids: | 324 |
| Molecular Weight: | 34720.91 Da |
| Theoretical pI: | 8.3 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 7.41% |
| Cysteine CYS (C) | 17 | 5.25% |
| Glutamic Acid GLU (E) | 6 | 1.85% |
| Aspartic Acid ASP (D) | 17 | 5.25% |
| Glycine GLY (G) | 45 | 13.89% |
| Phynylalanine PHE (F) | 16 | 4.94% |
| Isoleucine ILE (I) | 15 | 4.63% |
| Histidine HIS (H) | 4 | 1.23% |
| Lysine LYS (K) | 7 | 2.16% |
| Methionine MET (M) | 5 | 1.54% |
| Leucine LEU (L) | 22 | 6.79% |
| Asparagine ASN (N) | 17 | 5.25% |
| Glutamine GLN (Q) | 14 | 4.32% |
| Proline PRO (P) | 22 | 6.79% |
| Serine SER (S) | 30 | 9.26% |
| Arginine ARG (R) | 20 | 6.17% |
| Threonine THR (T) | 16 | 4.94% |
| Tryptophan TRP (W) | 8 | 2.47% |
| Valine VAL (V) | 8 | 2.47% |
| Tyrosine TYR (Y) | 11 | 3.4% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1517 |
| Hydrogen | H | 2298 |
| Nitrogen | N | 438 |
| Oxygen | O | 459 |
| Sulphur | S | 22 |
| Formula | C1517H2298N438O459S22 |
| Total Number of Atoms: | 4734 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 61390 Absorption 0.1% (=1 g/l) 1.768, assuming all pairs of CYS residues form cystines Ext. coefficient 60390 Absorption 0.1% (=1 g/l) 1.739, assuming all CYS residues are reduced |
| Aromaticity: | 0.108 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.71 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.69, 35.19, 17.59] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 59.1049 |
| Grand average of hydropathicity (GRAVY): | -0.32 |